Well, since this thread reappeared out of nowhere, and the topic creator is nowhere to be seen, I updated this for BNW. Patronage/Commerce and Piety/Rationalism are no longer mutually exclusive, and each civ will have five policy trees and one ideology.
Order is the least represented ideology because communism wasn't that popular among the civs represented in the game, so I was looking for excuses to put it in places to make the ratio between the three more balanced. Like Portugal and Sweden have socialist elements in their government, for instance.
Also I'm posting this because I'm not sure on some of these and discussion can iron out the kinks in this list.
America - Liberty, Honor, Piety, Commerce, Rationalism, Freedom.
Arabia - Tradition, Honor, Piety, Commerce, Rationalism, Autocracy.
Assyria - Tradition, Liberty, Honor, Patronage, Rationalism, Autocracy.
Austria - Tradition, Honor, Patronage, Aesthetics, Rationalism, Autocracy.
Aztecs - Tradition, Honor, Piety, Patronage, Aesthetics, Autocracy.
Babylon - Liberty, Honor, Piety, Commerce, Rationalism, Autocracy.
Brazil - Tradition, Liberty, Commerce, Exploration, Rationalism, Autocracy.
Byzantium - Tradition, Honor, Piety, Aesthetics, Commerce, Autocracy.
Carthage - Tradition, Liberty, Honor, Commerce, Exploration, Freedom.
Celts - Liberty, Honor, Piety, Patronage, Aesthetics, Freedom.
China - Tradition, Liberty, Aesthetics, Commerce, Rationalism, Order.
Denmark - Liberty, Honor, Patronage, Exploration, Rationalism, Freedom.
Egypt - Tradition, Liberty, Piety, Aesthetics, Rationalism, Order.
England - Tradition, Liberty, Commerce, Exploration, Rationalism, Freedom.
Ethiopia - Tradition, Honor, Piety, Patronage, Commerce, Order.
France - Tradition, Liberty, Patronage, Aesthetics, Rationalism, Freedom.
Germany - Tradition, Honor, Aesthetics, Commerce, Rationalism, Autocracy.
Greece - Liberty, Honor, Patronage, Aesthetics, Rationalism, Freedom.
Huns - Liberty, Honor, Patronage, Commerce, Exploration, Autocracy.
Inca - Tradition, Honor, Patronage, Commerce, Rationalism, Order.
India - Tradition, Liberty, Piety, Patronage, Aesthetics, Order.
Indonesia - Tradition, Honor, Patronage, Commerce, Exploration, Autocracy.
Iroquois - Liberty, Honor, Piety, Patronage, Commerce, Freedom.
Japan - Tradition, Honor, Patronage, Commerce, Rationalism, Autocracy.
Korea - Tradition, Honor, Patronage, Aesthetics, Rationalism, Freedom.
Mayans - Tradition, Liberty, Piety, Patronage, Rationalism, Order.
Mongolia - Tradition, Liberty, Honor, Commerce, Exploration, Order.
Morocco - Tradition, Honor, Piety, Commerce, Rationalism, Freedom.
Netherlands - Tradition, Liberty, Piety, Commerce, Exploration, Freedom.
Ottomans - Tradition, Liberty, Patronage, Commerce, Rationalism, Autocracy.
Persia - Liberty, Honor, Patronage, Aesthetics, Commerce, Autocracy.
Poland - Tradition, Liberty, Piety, Patronage, Commerce, Freedom.
Polynesia - Tradition, Liberty, Piety, Patronage, Exploration, Freedom.
Portugal - Tradition, Liberty, Patronage, Commerce, Exploration, Order.
Rome - Liberty, Honor, Patronage, Aesthetics, Rationalism, Autocracy.
Russia - Tradition, Liberty, Piety, Patronage, Rationalism, Order.
Shoshone - Tradition, Honor, Piety, Patronage, Commerce, Freedom.
Siam - Tradition, Honor, Piety, Patronage, Commerce, Autocracy.
Songhai - Liberty, Honor, Piety, Patronage, Commerce, Order.
Spain - Tradition, Liberty, Piety, Commerce, Exploration, Autocracy.
Sweden - Liberty, Honor, Piety, Commerce, Rationalism, Order.
Venice - Tradition, Liberty, Aesthetics, Commerce, Exploration, Freedom.
Zulus - Tradition, Liberty, Honor, Patronage, Commerce, Autocracy.