Redirecting the file path?

[Onionsoilder]

I'm working on a merge of three different mods, and I'm having a bit of trouble. I have the merge in it's own folder(obviously) but for some reason it keeps trying to look into the base folder for files. It loads the XML files from the folder it is supposed to, but it continues to load the python files from the mod folder I used as a base, and not the folder the mod is actually in(I.E., the merge is located in BtS/Mods/Merge. It tries to load the python files from BtS/Mods/BaseMod). Anyone know why this is happening and how I can fix it?

EDIT: NVM, I found the problem. A python file was directing the game to look in the old mod folder.