Ty Sting, this is only a beta version, i´v changed many things for new one and still have a lot of work and playtesting for this to improve into a real quality play.
To speed up turns, go to preferences and disable:
-shut off show friends moves;
-shut off show enemy moves;
If stil it´s slow, shut off also:
-animate enemy moves;
This will speed up things, also, when you are plaing the scenario, press CTRL+ALT+DEL and go to the Windows Task MAnager Tab, in applications select the Civ3conquests running, right click over it and select "go to process", you will be take to Civ3Conquests.exe process, right click again on that highlighted process and select "Set Priority -> Real Time", you can close the task manager now.
This will also increase IBT turn sequence times, don´t forget to close all other apps running on the background like music players (you should be listening to the music of the scenario anyway, it´s glorious!).
I will make some smaller maps and implement the mod onto them in the future, meanwhile try this things i stated.