Hmm? Looking at your orders, I'm unsure what the problem is. You put 29 into expansion (I expanded to many of those random tiny islands in the west), you put 100 YC into Urbeaurum, which is a 10 population increase, then you put 170 into research, which adds up to 299. Granted, I still never fixed the tech screenshots (cut's off everyone under SouthernKing for Naval tech) and EDIT: I have just fixed it.
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Although I did spot that I accidentally had given you 15 extra into Army Defense Tech when you are needing 15 YC to get out of Naval Tech 1. I used all 29 YC into expansion, so there was no leftover for Naval Tech 3.
Wait, did you want me to remove some population and put it into Nav 3?