I found out how to fix Civanator's multi-figure modern infantry, it had a different color table from that of Balou's, the guy that did the original single figure modern infantry. So I used photoshop to take the color table from Balou's and loaded it into Civanator's. It works fine now but I'm having touble uploading the fixed files so Im just gonna list how I did it.
1. exported at least one storyboard PCX from Balou's modern infantry (with flicster, of course).
2. opened that storyboard PCX with photoshop and saved its color table (Image->Mode->Color Table...->Save). There would be a saved .ACT file
3. exported all Civanator's FLC's, with flicster again
4. opened just the storyboad PCX with photoshop, converted it to
RGB color mode (Image-Mode->RGB Color)
5. converted it BACK to indexed mode, this time using the .ACT file
from Balou's modern infantry (Image->Mode->RGB Color... -- choose "Custom..." from Palette list and Load the .ACT file)
6. save PCX file
7. Make the FLC with the new storyboards, again with flicster