tokala: Ah, thanks, that's a weird but simple fix.
Iceciro: I try to use forceoverwrite as little as possible to preserve some modicum of mod compatibility (not that there is much in any case). If I forceoverwrite everything there is little point in it being a module rather than a straight mod.
...The strange thing is, most of these issues that are cropping up, I'm not experiencing myself, which makes it dang annoying to try and bugfix them.
In any case, I am 90% sure from my previous talks with Xien that forceoverwrite should not need to be used for changing things, just for removing things. As long as its showing up in game as a 10% bonus (which it is, for me at least), I'm going to assume it's working. As far as the broken pedia issue... that's a toughie. Only thing I can think of, and this is a silly question but just me trying to cover all the bases, is did you make sure modular loading is turned OFF in your ini?
Other then that, I really don't know. Later today (when I'm a bit more awake) I'm gonna check all my work for duplicate entries to see if that could be the issue. If that doesn't turn anything up, I'm really gonna be at the end of my rope...