I think that most Honor's values fit the personalities of the leaders pretty well. Some nitpicks, through -
I'd lower the Order modifier for Elohim to 30-50. They seem to be more suited for Empyrian, lorewise, then for the Order.
Thessa should be slightly more tolerant of evil religions, then Arendel.
Maybe Sidar should have slightly more weight to CoE. Hannah should give more weight to OO. Why does Falamar dislike Good religions (Empyrean and Order) more then Hannah? From what I've read about them, it should be the opposite.
I don't think of the Doviello (or even Clan) as having a predetermined love of AV. Actually, of all the religions of the game, a more barbaric interpretation of FoL fits them quite nicely - their society is built on the Nature's "survival of the fittest" principle. Perhaps Mahala, as the more moderate of the two Doviello leaders, should have a slightly lower distaste of Good religions.
Perpentach really should vaule OO, for its madness aspects, more then AV.
To combat the early FoL influence, Faeryl should value CoE higher then FoL. Maybe 60 for CoE, 35 for FoL.
Maybe Flauros should have more weight to CoE and OO and less weight to AV.
Don't know anything about the FF leaders.